Systems Biology Workbench Modules Page


Having one installer for all available applications taking care of the SBW framework might have hidden some of the components. To make it easier to take full advantage of the suite of software components we have created this site to show what modules are available for use with SBW:

3D Simulation

Auto Layout

Auto C#

Bifurcation Discovery Tool

Biomodels Importer

Frequency Analysis

Jacobian Viewer




Stochastic Simulation

SBML Translators



For more information on the Systems Biology Workbench see also our main website at

SourceForge page

In order to cite SBW please use this reference:

F.T. Bergmann, R.R. Vallabhajosyula and H.M. Sauro. Computational Tools for Modeling Protein Networks. Current Proteomics Pp. 181-197 Volume 3(3),(2006)

Frank T. Bergmann, Herbert M. Sauro. Computational systems biology: modularity and composition: SBW - a modular framework for systems biology. Frank T. Bergmann, Herbert M. Sauro December 2006 Proceedings of the 37th conference on Winter simulation WSC '06 Publisher: Winter Simulation Conference Pages: 1637 - 1645

HUCKA M, FINNEY A, SAURO HM, BOLOURI H, DOYLE J, KITANO H. (2002) The ERATO Systems Biology Workbench: enabling interaction and exchange between software tools for computational biology. Pac Symp Biocomput. 2002;:450-61.


SBW and its modules are funded through the generous support of: