Systems Biology Workbench Modules Page

 
 

Having one installer for all available applications taking care of the SBW framework might have hidden some of the components. To make it easier to take full advantage of the suite of software components we have created this site to show what modules are available for use with SBW:


3D Simulation

Auto Layout

Auto C#

Bifurcation Discovery Tool

Biomodels Importer

Frequency Analysis

Jacobian Viewer

Jarnac

JDesigner

RoadRunner

Stochastic Simulation

SBML Translators

 

About THIS SITE

For more information on the Systems Biology Workbench see also our main website at http://sys-bio.org.


SourceForge page


In order to cite SBW please use this reference:


F.T. Bergmann, R.R. Vallabhajosyula and H.M. Sauro. Computational Tools for Modeling Protein Networks. Current Proteomics Pp. 181-197 Volume 3(3),(2006)

Frank T. Bergmann, Herbert M. Sauro. Computational systems biology: modularity and composition: SBW - a modular framework for systems biology. Frank T. Bergmann, Herbert M. Sauro December 2006 Proceedings of the 37th conference on Winter simulation WSC '06 Publisher: Winter Simulation Conference Pages: 1637 - 1645

HUCKA M, FINNEY A, SAURO HM, BOLOURI H, DOYLE J, KITANO H. (2002) The ERATO Systems Biology Workbench: enabling interaction and exchange between software tools for computational biology. Pac Symp Biocomput. 2002;:450-61.

FUNDING

SBW and its modules are funded through the generous support of: